MINC/SoftwareDevelopment/EZMINC/AdditionalTools

Additional tools provided with EZminc
= Non-local means filter = Implementation of non-local means noise removing filter, described in ''P. Coupe, P. Yger, S. Prima, P. Hellier, C. Kervrann, C. Barillot. An Optimized Blockwise Non Local Means Denoising Filter for 3D Magnetic Resonance Images. IEEE Transactions on Medical Imaging, 27(4):425-441,  April 2008'' is provided in mincnlm program. To build select  option during configuration. The algorithm is protected by a license IDDN.FR.001.070033.000.S.P.2007.000.21000

= Defacing = Defacing mini-pipeline together with additional tools is provided, to build tools and install scripts specify  option and provide the location of GSL library. Note that additional tools from mni_autoreg, N3 and conglomerate are needed.